mimicCenPlotMark: mimicCenPlotMark This is an internal function that plot marks

In idiogramFISH: Shiny App. Idiograms with Marks and Karyotype Indices

Description

It returns a plot

Usage

mimicCenPlotMark(
  squareness,
  xMark,
  yMark,
  defCenStyleCol,
  listOfdfMarkPosCenStyle,
  chrWidth,
  specialChrWidth,
  yfactor,
  n,
  lwd.mimicCen,
  listOfdfChromSize,
  circularPlot,
  y,
  markLabelSize,
  separFactor,
  labelSpacing,
  circleCenter,
  circleCenterY,
  radius,
  ylistTransChr,
  rotation,
  labelOutwards,
  yMarkLine,
  xMarkRightLine,
  xMarkLeftLine,
  x,
  cenFormat = "triangle"
)

Arguments

squareness	squareness of vertices <
xMark	x component of polygon
yMark	yMark component of polygon
listOfdfMarkPosCenStyle	list of df. of mark pos.
chrWidth	numeric, width of chr.
specialChrWidth	numeric, width of chr.
yfactor	yMark distortion based on canvas proportion
n	numeric, to define vertices of rounded portions
listOfdfChromSize	chr size df list
circularPlot	boolean TRUE for circ.
y	list, y coords.
markLabelSize	numeric, font size
separFactor	numeric, sep. kars.
labelSpacing	numeric, spacing
circleCenter	numeric
circleCenterY	numeric
radius	numeric
ylistTransChr	list, transf. coords.
rotation	rotate
labelOutwards	srt
dfMarkColorInternal	colors for marks
lwd.chr	thick of border line

Value

plot

idiogramFISH documentation built on Sept. 30, 2021, 5:07 p.m.