perMark: FUNCTION perMark

Description Usage Arguments Value Examples

View source: R/perMark.R

Description

calculates fraction (%) of chromosome for each mark

Usage

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perMark(dfMarkPos, listOfdfChromSize, result = "list", bToRemove = "")

Arguments

dfMarkPos

data.frame, of marks' position

listOfdfChromSize

list of data.frames or data.frame of chr. sizes.

result

character, type of return, "data.frame" or "list"

bToRemove

character vector, bands to ignore

Value

list

Examples

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load(system.file("shinyApps", "iBoard/www/rda/monoholoCS.rda", package = "idiogramFISH") )
load(system.file("shinyApps", "iBoard/www/rda/monoholoMarks.rda", package = "idiogramFISH") )
monoholoMarks2 <- fillMarkInfo(monoholoMarks,monoholoCS)
perMark(monoholoMarks2,monoholoCS, result="data.frame")

idiogramFISH documentation built on Sept. 30, 2021, 5:07 p.m.