API for idiogramFISH
Shiny App. Idiograms with Marks and Karyotype Indices

Global functions
.onAttach Source code
OTUlabelsright Source code
`%W>%` Source code
addAttributesDfChrSize Man page Source code
addAttributesDfChrSizeSimple Source code
addChrNameAttrMark Source code
addChrNameAttrMarkDots Source code
addChrSizeColumn Source code
addNeworderColumn Source code Source code
addNotes Man page Source code
addOTUnames Source code
allChrSizeSample Man page
allMarksSample Man page
applyMapCircle Source code
armRatioCI Man page Source code
arrowPlotMark Man page Source code
asymmetry Man page Source code
asymmetryA2 Man page Source code
bigdfChrSizeHolo Man page
bigdfMarkPosHolo Man page
bigdfOfChrSize Man page
bigdfOfChrSize3Mb Man page
bigdfOfMarks Man page
bigdfOfMarks3Mb Man page
blanks2 Source code
blanks3 Source code
cMLeftPlotMark Source code
cMPlotMark Man page Source code
centerMarkMapPer Source code
checkArmHolocenError Man page Source code
checkNameChrDfMarks Man page Source code
chrbasicdataHolo Man page
chrbasicdatamono Man page
chrtSqMark Source code
circLabelMark Source code
circPlotDots Source code
citrusMarkPos Man page Source code
citrusSize Man page Source code
customCeiling Man page Source code
dfAlloParentMarks Man page
dfAlloParentMarksHolo Man page
dfChrSizeHolo Man page
dfMarkColor Man page
dfMarkColor5S25S Man page
dfMarkPosHolo Man page
dfMarkStyle Man page
dfOfChrSize Man page
dfOfMarks Man page
dfOfMarks2 Man page
dfToListColumn Man page Source code
drawCen Source code
drawCenMarks Source code
drawCenStyle Source code
drawPlot Source code
drawPlotMark Source code
drawPlotMarkLine Source code
error Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
fillMarkInfo Man page Source code
fillMarkInfo2 Man page Source code
filterExtraOTU Man page Source code
filter_colors Source code
fixChrNameDupDF Man page Source code
formatFs Source code
genBankReadIF Man page Source code
humChr Man page
humMarkColor Man page
humMarkPos Man page
idiogramFISH Man page
idiogramFISH-package Man page
insertInList Man page Source code
intercalate Source code
make.uniqueIF Man page Source code
makeCharCols Source code
makeNumCols Man page Source code
makeRoundCoordXY Source code
makeVectorNames Man page Source code
makedfMarkColor Man page Source code
makedfMarkColorMycolors Man page Source code
mapChrCenter Source code
mapCircle Source code
mapGGChr Man page Source code
mapGGChrMark Man page Source code
mapOTUnames Source code
mapRadius Source code
mapXY Man page Source code
mapXYCen Source code
mapXYCenLines Source code
mapXYCenMimic Man page Source code
mapXYCenMimicInside Source code
mapXYchromatidHolo Source code
mapXYchromatidHoloRo Source code
mapXYchromatidLA Source code
mapXYchromatidLARo Source code
mapXYchromatidSA Source code
mapXYchromatidSARo Source code
mapXYmarksRo Source code
mapxyRoundCenLines Source code
markDistCenGISHfix Man page Source code
markMapPer Source code
markMapPerCen Source code
markMapPerDots Source code
markMapPercM Source code
markOverCMA Man page Source code
markdataholo Man page
markposDFs Man page
mimicCenPlotMark Man page Source code
mimicCenPlotMarkInside Source code
mydfMaColor Man page
namesToColumns Man page Source code
newOrderColumn Man page Source code
oneDot Source code
parentalAndHybChrSize Man page
parentalAndHybHoloChrSize Man page
perMark Man page Source code
plotChrNames Source code
plotDotMarks Man page Source code
plotIdiograms Man page Source code
plotlabelsright Man page Source code
posCalc Man page Source code
processNameVar Source code
processNameVarAndFormula Source code
psum Source code
radDotsPer Source code
removeNAFromList Man page Source code
robert Man page Source code
roundPlotMark Man page Source code
rulerPlot Man page Source code
rulerTitle Man page Source code
runBoard Man page Source code
swapChrRegionDfSizeAndMarks Man page Source code
textLabel Man page Source code
textLabelCen Source code
textLabelDots Man page Source code
textLabelLeft Source code
transRadDots Source code
transYList Source code
transyListCen Source code
transyListMark Source code
transyListMarkDots Source code
traspaMarks Man page
traspadf Man page
xHortoVer Source code
xHortoVerDots Source code
xHortoVerMid Source code
xHortoVerRoundCen Source code
xHortoVerRoundCenExt Source code
xMarkMap Source code
xMarkMapLeft Source code
yVertoHor Man page Source code
idiogramFISH documentation built on Sept. 30, 2021, 5:07 p.m.