Files in lme4

Linear Mixed-Effects Models using 'Eigen' and S4

R/GHrule.R R/methods.R R/utilities.R R/nbinom.R R/mcmcsamp.R R/AllClass.R R/modular.R R/predict.R R/rePCA.R R/vcconv.R R/plot.R R/lmer.R R/sparsegrid.R R/plots.R R/deriv.R R/profile.R R/allFit.R R/zzz.R R/optimizer.R R/checkConv.R R/AllGeneric.R R/lmList.R R/simulate.formula.R R/lmerControl.R R/error_factory.R R/bootMer.R inst/doc/lmerperf.Rmd inst/doc/lmerperf.R inst/doc/lmer.R inst/doc/PLSvGLS.pdf inst/doc/PLSvGLS.R inst/doc/Theory.pdf inst/doc/lmer.pdf inst/doc/Theory.R inst/testdata/strip_env.R inst/testdata/trees513.R inst/testdata/lme-tst-funs.R inst/testdata/koller-data.R inst/testdata/lme-tst-fits.R inst/testdata/harmel_density.R tests/varcorr.R tests/lmer2_ex.R tests/lmList-tst.R tests/prLogistic.R tests/testOptControl.R tests/glmmWeights.R tests/predsim.R tests/respiratory.R tests/lmer-conv.R tests/hatvalues.R tests/testcrab.R tests/testcolonizer.R tests/methods.R tests/drop1contrasts.R tests/dynload.R tests/is.R tests/REMLdev.R tests/vcov-etc.R tests/glmerWarn.R tests/nbinom.R tests/nlmer.R tests/elston.R tests/simulate.R tests/test-glmernbref.R tests/profile-tst.R tests/throw.R tests/getME.R tests/fewlevels.R tests/priorWeights.R tests/boundary.R tests/falsezero_dorie.R tests/HSAURtrees.R tests/drop.R tests/ST.R tests/confint.R tests/glmmExt.R tests/lmer-1.R tests/glmer-1.R tests/resids.R tests/lmer-0.R tests/evalCall.R tests/polytomous.R tests/AAAtest-all.R tests/optimizer.R tests/predict_basis.R tests/modFormula.R tests/minval.R tests/glmerControlPass.R tests/refit.R tests/lme4_nlme.R tests/nlmer-conv.R tests/offset.R tests/extras.R tests/devCritFun.R tests/agridat_gotway.R tests/priorWeightsModComp.R tests/bootMer.R tests/testthat/test-lmer.R tests/testthat/test-stepHalving.R tests/testthat/test-oldRZXfailure.R tests/testthat/test-resids.R tests/testthat/test-doubleVertNotation.R tests/testthat/test-glmer.R tests/testthat/test-nlmer.R tests/testthat/test-utils.R tests/testthat/test-glmmFail.R tests/testthat/test-glmFamily.R tests/testthat/test-methods.R tests/testthat/test-catch.R tests/testthat/test-formulaEval.R tests/testthat/test-predict.R tests/testthat/test-nbinom.R tests/testthat/test-NAhandling.R tests/testthat/test-glmernbref.R tests/testthat/test-start.R tests/testthat/test-ranef.R tests/testthat/test-rank.R tests/testthat/test-simulate_formula.R tests/testthat/test-lmList.R tests/testthat/test-eval.R tests/testthat/test-lmerResp.R tests/testthat/test-factors.R tests/testthat/test-allFit.R tests/testthat/test-summary.R tests/testthat/test-glmernb.R vignettes/lmerperf.Rmd man/merMod-class.Rd man/rePos-class.Rd man/profile-methods.Rd man/GHrule.Rd man/lmList.Rd man/nlmer.Rd man/troubleshooting.Rd man/isREML.Rd man/nlformula.Rd man/merPredD-class.Rd man/convergence.Rd man/dummy.Rd man/lmer.Rd man/lmerControl.Rd man/pvalues.Rd man/mkVarCorr.Rd man/simulate.merMod.Rd man/drop1.merMod.Rd man/golden-class.Rd man/sleepstudy.Rd man/subbars.Rd man/utilities.Rd man/nloptwrap.Rd man/VarCorr.Rd man/VerbAgg.Rd man/namedList.Rd man/mkRespMod.Rd man/Arabidopsis.Rd man/checkConv.Rd man/plots.thpr.Rd man/mkSimulationTemplate.Rd man/vcconv.Rd man/mkReTrms.Rd man/glmer.Rd man/fortify.Rd man/glmer.nb.Rd man/lmList4-class.Rd man/Nelder_Mead.Rd man/glmFamily-class.Rd man/rePCA.Rd man/expandDoubleVerts.Rd man/cbpp.Rd man/plot.merMod.Rd man/refitML.Rd man/isNested.Rd man/glmerLaplaceHandle.Rd man/ranef.Rd man/findbars.Rd man/glmFamily.Rd man/devcomp.Rd man/cake.Rd man/grouseticks.Rd man/Dyestuff.Rd man/InstEval.Rd man/NelderMead-class.Rd man/nobars.Rd man/allFit.Rd man/sigma.Rd man/lme4-package.Rd man/Pastes.Rd man/lmResp.Rd man/influence.merMod.Rd man/bootMer.Rd man/isSingular.Rd man/GQdk.Rd man/lme4_testlevel.Rd man/merPredD.Rd man/simulate.formula.Rd man/devfun2.Rd man/confint.merMod.Rd man/getME.Rd man/residuals.merMod.Rd man/mkMerMod.Rd man/Penicillin.Rd man/rePos.Rd man/factorize.Rd man/refit.Rd man/fixef.Rd man/hatvalues.merMod.Rd man/ngrps.Rd man/modular.Rd man/predict.merMod.Rd man/lmResp-class.Rd