API for mixOmics
Omics Data Integration Project

Global functions
BinarySearch Source code
Check.entry.pls Source code
Check.entry.rgcca Source code
Check.entry.sgcca Source code
Check.entry.single Source code
Check.entry.wrapper.mint.block Source code
Koren.16S Man page
LOGOCV Source code
MCVfold.block.splsda Source code
MCVfold.splsda Source code
Mfold Source code
add.alpha Source code
auc_roc Source code
auroc Man page Source code
auroc.mint.plsda Man page
auroc.mint.splsda Man page
auroc.plsda Man page
auroc.sgccda Man page Source code
auroc.splsda Man page
background.predict Man page Source code
bez Source code
bezierCurve Source code
bin.color Source code
block.pls Man page Source code
block.plsda Man page Source code
block.spls Man page Source code
block.splsda Man page
breast.TCGA Man page
breast.tumors Man page
check.input.plotIndiv Source code
check.input.plotLoadings Source code
cim Man page Source code
cimDiablo Man page Source code
circosPlot Man page Source code
clr.backtransfo Source code
clr.transfo Source code
color.GreenRed Man page Source code
color.jet Man page Source code
color.mixo Man page Source code
color.spectral Man page Source code
coords Source code
coords.roc Source code
cov2 Source code
defl.select Source code
deflation Source code
diverse.16S Man page
do.scale Source code
draw.arc.pg Source code
draw.arc.s Source code
draw.line Source code
draw.line2 Source code
draw.line3 Source code
draw.link Source code
draw.link.pg Source code
draw.link2 Source code
draw.point.w Source code
draw.text.rt Source code
draw.text.w Source code
drawIdeogram Source code
drawLinePlot Source code
drawLinks Source code
estim.regul Man page
estim.regul.default Man page
explained_variance Man page Source code
genChr Source code
genLinks Source code
get.BER Man page Source code
get.confusion_matrix Man page Source code
get.contrib.df Source code
get.keepA Source code
get.loadings.ndisplay Source code
get.name.and.value Source code
get.weights Source code
ica.def Source code
ica.par Source code
ilr.transfo Source code
image.estim.regul Man page
image.tune.rcc Man page Source code
imageMap Source code
imgCor Man page Source code
initialisation_by_svd Source code
initsvd Source code
internal_getVariatesAndLabels Source code
internal_graphic.perf Source code
internal_graphicModule Source code
internal_mint.block Source code
internal_predict.DA Source code
internal_wrapper.mint Source code
internal_wrapper.mint.block Source code
ipca Man page Source code
l2.norm Source code
layout.plotLoadings Source code
linnerud Man page
liver.toxicity Man page
logratio.transfo Man page Source code
map Man page Source code
mat.rank Man page Source code
mean_centering_per_study Source code
mint.block.pls Man page Source code
mint.block.plsda Man page Source code
mint.block.spls Man page Source code
mint.block.splsda Man page Source code
mint.pca Man page Source code
mint.pls Man page Source code
mint.plsda Man page Source code
mint.spls Man page Source code
mint.splsda Man page Source code
miscrossprod Source code
mixOmics Man page Source code
multidrug Man page
nearZeroVar Man page Source code
network Man page Source code
network.default Man page
network.pls Man page
network.rcc Man page
network.spls Man page
nipals Man page Source code
norm2 Source code
nutrimouse Man page
onAttach Source code
panel.ellipses Source code
pca Man page Source code
pcasvd Source code
pcatune Man page
perf Man page Source code
perf.mint.splsda Man page
perf.pls Man page
perf.plsda Man page
perf.sgccda Man page Source code
perf.spls Man page
perf.splsda Man page
plot.perf Man page
plot.perf.mint.plsda.mthd Man page
plot.perf.mint.splsda.mthd Man page
plot.perf.pls.mthd Man page
plot.perf.plsda.mthd Man page
plot.perf.sgccda.mthd Man page Source code
plot.perf.spls.mthd Man page
plot.perf.splsda.mthd Man page
plot.rcc Man page Source code
plot.tune Man page
plot.tune.block.splsda Man page Source code
plot.tune.splsda Man page
plotArrow Man page Source code
plotDiablo Man page
plotIndiv Man page Source code
plotIndiv.mint.spls Man page
plotIndiv.mint.splsda Man page
plotIndiv.pca Man page Source code
plotIndiv.pls Man page
plotIndiv.rcc Man page Source code
plotIndiv.rgcca Man page
plotIndiv.sgcca Man page
plotIndiv.sipca Man page
plotIndiv.spls Man page
plotLoadings Man page Source code
plotLoadings.block.pls Man page
plotLoadings.block.plsda Man page
plotLoadings.block.spls Man page
plotLoadings.block.splsda Man page
plotLoadings.mint.pls Man page
plotLoadings.mint.plsda Man page
plotLoadings.mint.spls Man page
plotLoadings.mint.splsda Man page
plotLoadings.pca Man page Source code
plotLoadings.pls Man page
plotLoadings.plsda Man page
plotLoadings.rcc Man page
plotLoadings.rgcca Man page Source code
plotLoadings.sgcca Man page
plotLoadings.sgccda Man page Source code
plotLoadings.spls Man page
plotLoadings.splsda Man page
plotVar Man page Source code
plotVar.pca Man page
plotVar.pls Man page
plotVar.plsda Man page
plotVar.rcc Man page
plotVar.rgcca Man page
plotVar.sgcca Man page
plotVar.spca Man page
plotVar.spls Man page
plotVar.splsda Man page
plot_error_bar Source code
pls Man page Source code
plsda Man page Source code
predict.mint.block.pls Man page
predict.mint.block.plsda Man page
predict.mint.block.spls Man page
predict.mint.block.splsda Man page
predict.mint.pls Man page
predict.mint.plsda Man page
predict.mint.spls Man page
predict.mint.splsda Man page
predict.pls Man page
predict.plsda Man page
predict.spls Man page Source code
predict.splsda Man page
print Man page
print.ipca Source code
print.mint.pls Source code
print.mint.plsda Source code
print.mint.spls Source code
print.mint.splsda Source code
print.pca Man page Source code
print.perf.mint.splsda.mthd Source code
print.perf.pls.mthd Source code
print.perf.plsda.mthd Source code
print.perf.sgccda.mthd Source code
print.perf.spls.mthd Source code
print.perf.splsda.mthd Source code
print.pls Man page Source code
print.plsda Source code
print.predict Source code
print.rcc Man page Source code
print.rgcca Man page Source code
print.sgcca Man page Source code
print.sgccda Source code
print.sipca Source code
print.spca Man page Source code
print.spls Man page Source code
print.splsda Source code
print.summary Man page Source code
print.tune.block.splsda Source code
print.tune.mint.splsda Source code
print.tune.pca Source code
print.tune.rcc Source code
print.tune.splsda Source code
rcc Man page Source code
rcc.default Man page
roc.default Source code
roc.utils.match.coords.ret.args Source code
roc.utils.max.partial.auc Source code
roc.utils.max.partial.auc.auc Source code
roc.utils.max.thresholds.idx Source code
roc.utils.min.partial.auc Source code
roc.utils.min.partial.auc.auc Source code
roc.utils.perfs Source code
scale.function Source code
scale.function_old Source code
scale.v Source code
segAnglePo Source code
select.var Man page
selectVar Man page Source code
selectVar.pca Man page Source code
selectVar.pls Man page
selectVar.rgcca Man page
selectVar.sgcca Man page
selectVar.spls Man page
shape.input.plotIndiv Source code
sipca Man page Source code
soft Source code
soft.threshold Source code
soft_thresholding_L1 Source code
sort.roc Source code
sparse.mint.block_iteration Source code
sparse.rgcca_iteration Source code
sparsity Source code
spca Man page Source code
splotMatPlot Source code
spls Man page Source code
splsda Man page Source code
srbct Man page
statauc Source code
stemcells Man page
stop.message Source code
stratified.subsampling Source code
study_split Man page Source code
summary Man page
summary.pls Man page
summary.rcc Man page Source code
summary.spls Man page
t.test.process Source code
tau.estimate Source code
tune Man page Source code
tune.block.splsda Man page Source code
tune.mint.splsda Man page Source code
tune.pca Man page Source code
tune.rcc Man page Source code
tune.rcc.default Man page
tune.splsda Man page Source code
tune.splslevel Man page Source code
unmap Man page Source code
vac18 Man page
vac18.simulated Man page
vip Man page Source code
withinVariation Man page Source code
wrapper.rgcca Man page Source code
wrapper.sgcca Man page Source code
wrapper.sgccda Man page
yeast Man page
mixOmics documentation built on Nov. 26, 2017, 5:02 p.m.