nodelabels.cophylo: Add labels to a plotted "cophylo" object

In phytools: Phylogenetic Tools for Comparative Biology (and Other Things)

Add labels to a plotted "cophylo" object

Description

This function adds node, edge, or tip labels to the plotted trees of a "cophylo" object.

Usage

nodelabels.cophylo(..., which=c("left","right"))
edgelabels.cophylo(..., which=c("left","right"))
tiplabels.cophylo(..., which=c("left","right"))

Arguments

...	arguments to be passed to nodelabels, edgelabels, or tiplabels.
which	argument indicated which of the two plotted trees (the "left" or "right" tree) to be used.

Details

Note that the order of tips, edges, and nodes may be different in the object of class "cophylo" than they are in the original input trees, particularly if cophylo(...,rotate=TRUE) was used.

Author(s)

Liam Revell [e-mail]

References

Paradis, E., J. Claude, and K. Strimmer (2004) APE: Analyses of phylogenetics and evolution in R language. Bioinformatics, 20, 289-290.

Revell, L. J. (2024) phytools 2.0: an updated R ecosystem for phylogenetic comparative methods (and other things). PeerJ, 12, e16505.

See Also

cophylo, edgelabels, nodelabels, tiplabels

phytools documentation built on Nov. 5, 2025, 5:11 p.m.