state.freq.msa: Get the observed frequencies of states in an alignment

Description Usage Arguments Value Author(s)

View source: R/msa.R

Description

Get the observed frequencies of states in an alignment

Usage

1
state.freq.msa(align, mod)

Arguments

align

An object of type msa.

mod

An object of type tm representing a tree model.

Value

A numeric vector giving the observed frequencies of each state in the model

Author(s)

Melissa J. Hubisz and Adam Siepel


rphast documentation built on May 1, 2019, 9:26 p.m.