Nothing
inst/examples/informative-regions-msa.R
In rphast: Interface to 'PHAST' Software for Comparative Genomics
require("rphast")
m <- msa(seqs=c("A--ACGTAT-", "AG-AGGTAA-", "AGGAGGTA--"),
names=c("human", "mouse", "rat"))
informative.regions.msa(m, 1, refseq=NULL)
informative.regions.msa(m, 3, refseq=NULL)
informative.regions.msa(m, 3, refseq="mouse", spec=c("mouse", "rat"))
Try the rphast package in your browser
Any scripts or data that you put into this service are public.
rphast documentation built on May 1, 2019, 9:26 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
require("rphast")
m <- msa(seqs=c("A--ACGTAT-", "AG-AGGTAA-", "AGGAGGTA--"),
names=c("human", "mouse", "rat"))
informative.regions.msa(m, 1, refseq=NULL)
informative.regions.msa(m, 3, refseq=NULL)
informative.regions.msa(m, 3, refseq="mouse", spec=c("mouse", "rat"))
Try the rphast package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.