Nothing
inst/examples/write-msa.R
In rphast: Interface to 'PHAST' Software for Comparative Genomics
m <- msa(seqs=c("ACGTAT", "AGGTAA", "AGGTAG"),
names=c("human", "mouse", "rat"))
write.msa(m, "foo.ss")
write.msa(m, "foo.fa", pretty.print=TRUE)
write.msa(m, NULL, format="PHYLIP", pretty.print=TRUE)
#clean up
unlink("foo.ss")
unlink("foo.fa")
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rphast documentation built on May 1, 2019, 9:26 p.m.
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m <- msa(seqs=c("ACGTAT", "AGGTAA", "AGGTAG"),
names=c("human", "mouse", "rat"))
write.msa(m, "foo.ss")
write.msa(m, "foo.fa", pretty.print=TRUE)
write.msa(m, NULL, format="PHYLIP", pretty.print=TRUE)
#clean up
unlink("foo.ss")
unlink("foo.fa")
Try the rphast package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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