API for sequoia
Pedigree Inference from SNPs

Global functions
.simpleCap Source code
CalcBYprobs Man page Source code
CalcCorners Man page Source code
CalcLL Man page Source code
CalcMaxMismatch Man page Source code
CalcOHLLR Man page Source code
CalcPairLL Man page Source code
CalcRped Man page Source code
CheckAP Man page Source code
CheckGeno Man page Source code
CheckLH Man page Source code
CheckParams Man page Source code
ComparePairs Man page Source code
Conf_griffin Man page
CountAgeDif Man page Source code
DoErrors Man page Source code
DuplicateCheck Man page Source code
DyadCompare Man page Source code
ErM2V Source code
ErV2M Source code Source code
ErrPerSNP Man page Source code
ErrToM Man page Source code
EstConf Man page Source code
EstEr Man page Source code
FacToNum Source code
FieldMums_griffin Man page
FindFamilies Man page Source code
FoldSibGPs Man page Source code
FortifyPairs Man page Source code
GenoConvert Man page Source code
Geno_HSg5 Man page
Geno_griffin Man page
GetAnc Source code
GetAncestors Man page Source code
GetDesc Source code
GetDescendants Man page Source code
GetDummifiable Man page Source code
GetLLRAge Man page Source code
GetMaybeRel Man page Source code
GetRelA Man page Source code
GetRelM Man page Source code
Inherit_patterns Man page
LHConvert Man page Source code
LH_HSg5 Man page
LH_griffin Man page
LLRplot Man page Source code
MakeAgePrior Man page Source code
MaybeRel_griffin Man page
MergeFill Man page Source code
MkAPdefault Man page Source code
MkFortParams Man page Source code
MkGenoErrors Man page Source code
NumToID Man page Source code
OHperSNP Man page Source code
ParamToSpecs Man page Source code
PedCompare Man page Source code
PedPolish Man page Source code
PedStripFID Man page Source code
PedToNum Man page Source code
Ped_HSg5 Man page
Ped_griffin Man page
PlotAgePrior Man page Source code
PlotPairLL Man page Source code
PlotPedComp Man page Source code
PlotRelPairs Man page Source code
PlotSeqSum Man page Source code
PlotSnpStats Man page Source code
SeqOUT_HSg5 Man page
SeqOUT_griffin Man page
SeqParSib Man page Source code
SibMatch Man page Source code
SimGeno Man page Source code
SimGeno_example Man page
SmoothAP Man page Source code
SnpStats Man page Source code
SpecsToParam Man page Source code
StripFam Source code
SummarySeq Man page Source code
Vcomp Man page Source code
VennSquares Man page Source code
VtoM Source code
XtoM Source code
as.DF Source code
check.integer Source code
eqv Source code
getAssignCat Man page Source code
getGenerations Man page Source code
inflate Source code
is.wholenumber Source code
mtSame2Dif Man page Source code
namedlist Source code
orderLH Man page Source code
rc Man page Source code
sequoia Man page Source code
shrinkEM Source code
tdf Source code
tryCatch.W.E Man page Source code
tryPlot Source code
write.parents Source code
write.seq.xls Source code
writeColumns Man page Source code
writeSeq Man page Source code
sequoia documentation built on Sept. 8, 2023, 5:29 p.m.