API for sequoia
Pedigree Inference from SNPs

Global functions
.simpleCap Source code
ArrToDF Source code
CalcChi2 Man page Source code
CalcMaxMismatch Man page Source code
CalcOHLLR Man page Source code
CalcPairConf Source code
CalcSnpdBoth Man page Source code
CheckGeno Man page Source code
CheckLH Man page Source code
ChkOwnAnc Source code
ComparePairs Man page Source code
CountAgeDif Source code
DoErrors Man page Source code
DuplicateCheck Man page Source code
DyadCompare Man page Source code
ErrToM Man page Source code
EstConf Man page Source code
EstErr Man page Source code
FacToNum Source code
FindFamilies Man page Source code
GenoConvert Man page Source code
GetAncest Source code
GetDesc Source code
GetDummifiable Source code
GetMaybeRel Man page Source code
GetRelCat Man page Source code
IDToNum Source code
Inherit Man page
LHConvert Man page Source code
LH_HSg5 Man page
MakeAgePrior Man page Source code
MergeFill Man page Source code
MkGenoErrors Man page Source code
NumToID Source code
PedCompare Man page Source code
PedPolish Man page Source code
PedStripFID Man page Source code
Ped_HSg5 Man page
Ped_griffin Man page
PlotAgePrior Man page Source code
ReadSpecialInherit Source code
Replace Source code
SeqOUT_griffin Man page
SeqParSib Man page Source code
SeqPrep Man page Source code
SibMatch Man page Source code
SimGeno Man page Source code
SimGeno_example Man page
SnpStats Man page Source code
StripFam Source code
SummarySeq Man page Source code
Table Source code
Vcomp Man page Source code
VtoM Source code
check.integer Source code
check.numeric Source code
chop Source code
eqv Source code
fc Source code
getAssignCat Man page Source code
getGDO Source code
getGenerations Man page Source code
herm_clone_Geno Source code
herm_clone_LH Source code
herm_clone_Ped Source code
herm_unclone_Geno Source code
herm_unclone_MaybeRel Source code
herm_unclone_Ped Source code
herm_unclone_Trios Source code
is.wholenumber Source code
orderLH Man page Source code
pasteD Source code
plot.seq Man page Source code
rc Man page Source code
s Source code
sequoia Man page Source code
shrinkEM Source code
tbl.logic Source code
tdf Source code
write.parents Source code
write.seq.xls Source code
writeColumns Man page Source code
writeSeq Man page Source code
sequoia documentation built on July 1, 2020, 5:52 p.m.