Description Usage Arguments See Also Examples
View source: R/print.SIMoNeNet.R
This function displays specifically object of class SIMoNeNet, with previews of edge and node attributes.
1 2 |
x |
Object of class SIMoNeNet |
nlimit |
Which number of lines to preview for data frames |
... |
Additional parameters from generic print function |
SIMoNeNet
, SIMoNeNet.default
, getSIMoNeNet
, summary.SIMoNeNet
, export.SIMoNeNet
, FilterEdges.SIMoNeNet
, pickSIMoNeParam
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | # data(SpADataExpression)
# data(SpADEGenes)
# SpAData<-DEGeneExpr(t(SpADataExpression),SpADEGenes)
# NodesForSIMoNe<-rownames(SpADEGenes)[1:17]
# GaussianSpAData<-DEGeneExpr(t(SpADataExpression[NodesForSIMoNe,]),SpADEGenes[NodesForSIMoNe,])
# pickSIMoNeParam(GaussianSpAData)
# GlobalSIMoNeNet<-getSIMoNeNet(GaussianSpAData)
# GlobalSIMoNeNet<-FilterEdges(GlobalSIMoNeNet,0.4)
# print(GlobalSIMoNeNet,5)
# summary(GlobalSIMoNeNet)
# plot(GlobalSIMoNeNet)
# export(GlobalSIMoNeNet,"GlobalSIMoNeNet",T)
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