print.SIMoNeNet: Print function for object of class SIMoNeNet.

In stringgaussnet: PPI and Gaussian Network Construction from Transcriptomic Analysis Results Integrating a Multilevel Factor

Description

This function displays specifically object of class SIMoNeNet, with previews of edge and node attributes.

Usage

## S3 method for class 'SIMoNeNet'
print(x, nlimit = 20, ...)

Arguments

x	Object of class SIMoNeNet
nlimit	Which number of lines to preview for data frames
...	Additional parameters from generic print function

See Also

SIMoNeNet, SIMoNeNet.default, getSIMoNeNet, summary.SIMoNeNet, export.SIMoNeNet, FilterEdges.SIMoNeNet, pickSIMoNeParam

Examples

# data(SpADataExpression)
# data(SpADEGenes)
# SpAData<-DEGeneExpr(t(SpADataExpression),SpADEGenes)

# NodesForSIMoNe<-rownames(SpADEGenes)[1:17]
# GaussianSpAData<-DEGeneExpr(t(SpADataExpression[NodesForSIMoNe,]),SpADEGenes[NodesForSIMoNe,])

# pickSIMoNeParam(GaussianSpAData)

# GlobalSIMoNeNet<-getSIMoNeNet(GaussianSpAData)
# GlobalSIMoNeNet<-FilterEdges(GlobalSIMoNeNet,0.4)
# print(GlobalSIMoNeNet,5)
# summary(GlobalSIMoNeNet)
# plot(GlobalSIMoNeNet)

# export(GlobalSIMoNeNet,"GlobalSIMoNeNet",T)

stringgaussnet documentation built on May 29, 2017, 10:50 a.m.