system.ls: Run ls command

In varitas: Variant Calling in Targeted Analysis Sequencing Data

Description

Runs ls command on system. This is a workaround since list.files can not match patterns based on subdirectory structure.

Usage

system.ls(pattern = "", directory = "", error = FALSE)

Arguments

pattern	pattern to match files
directory	base directory command should be run from
error	logical indicating whether to throw an error if no matching founds found. Defaults to False.

Value

paths returned by ls command

varitas documentation built on Nov. 14, 2020, 1:07 a.m.