associate_histone_marks: Associate histone marks to a GRanges object.

Description Usage Arguments Value

View source: R/AnnotationHelper.R

Description

Associate histone marks to a GRanges object.

Usage

1
associate_histone_marks(regions, histone.regions)

Arguments

regions

A GRanges object to annotate.

genome.build

The name of the chosen annotation ("hg38", "mm9", "mm10", "hg19").

biosample

The biosample identifier from ENCODE. Valid examples are GM12878, K562 or MCF-7.

Value

The GRanges object with associated histone overlap percentage.


ArnaudDroitLab/ef.utils documentation built on Aug. 13, 2019, 9:09 p.m.