associate_genomic_region: Associate genomic regions to a GRanges object.
In ArnaudDroitLab/ef.utils: Eric Utilities
Description
Usage
Arguments
Value
View source: R/AnnotationHelper.R
Description
Associate genomic regions to a GRanges object.
Usage
1
2
associate_genomic_region(regions, genome.build, output.dir,
tssRegion = c(-3000, 3000))
Arguments
regions
A GRanges object to annotate.
genome.build
The name of the chosen annotation ("hg38", "mm9", "mm10", "hg19").
output.dir
The name of the directory where to write the selected annotations.
tssRegion
A vector with the region range to TSS.
Value
The GRanges object with associated genomic regions.
ArnaudDroitLab/ef.utils documentation built on Aug. 13, 2019, 9:09 p.m.
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Description Usage Arguments Value
View source: R/AnnotationHelper.R
Description
Associate genomic regions to a GRanges object.
Usage
1 2 | associate_genomic_region(regions, genome.build, output.dir,
tssRegion = c(-3000, 3000))
|
Arguments
regions |
A GRanges object to annotate. |
genome.build |
The name of the chosen annotation ("hg38", "mm9", "mm10", "hg19"). |
output.dir |
The name of the directory where to write the selected annotations. |
tssRegion |
A vector with the region range to TSS. |
Value
The GRanges object with associated genomic regions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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