annotate_region: Annotates a set of regions with genomic features.

In ArnaudDroitLab/ef.utils: Eric Utilities

Description

Given a genome build identifier, creates a list of annotation databases which can be passed to the annotation functions.

Usage

annotate_region(region, annotations.list, tssRegion = c(-3000, 3000),
  filename = NULL)

Arguments

region	The regions to annotate.
annotations.list	A list of annotation databases returned by select_annotations.
tssRegion	A vector with the region range to TSS.
filename	The name of the file where the results should be saved. If NULL, results are not saved to disk.

Value

An annotation object.

ArnaudDroitLab/ef.utils documentation built on Aug. 13, 2019, 9:09 p.m.