Description Usage Arguments Value
View source: R/AnnotationHelper.R
Given a set of regions, perform annotation, motif enrichment and KEGG enrichment.
1 2 | characterize_region(region, annotations.list, skip.motif = FALSE,
skip.kegg = FALSE, output.dir = "output/")
|
region |
A GRanges object with regions to be characterized. |
annotations.list |
A list of annotation databases returned by
|
skip.motif |
If |
skip.kegg |
If |
output.dir |
The directory where output should be stored.A directory for storing output. |
file.label |
A label for generating file names to save the results.
If |
A list containing the characterization results.
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