BaderLab/scClustViz: Differential Expression-based scRNAseq Cluster Assessment and Viewing

An interactive R Shiny tool for visualizing single-cell RNAseq clustering results from common analysis pipelines. Its main goal is two-fold: A: to help select a biologically appropriate resolution or K from clustering results by assessing differential expression between the resulting clusters; and B: help annotate cell types and identify marker genes.

install.packages("remotes")
remotes::install_github("BaderLab/scClustViz")