dmin: Calculates minimum genetic distance

Description Usage Arguments Details Value

Description

Calculates minimum population genetic distance from hamming distance

Usage

1
dmin(distMat, popList, pairs, ploidy)

Arguments

distMat

hamming distance matrix calculated using the hidden function genoDist

popList

List of populations made from pops dataframe provided by users

pairs

list of populaiton pairs generated in getDiversityStats

ploidy

numeric number of chromosomes

Details

Authours: Chris Ward Calculates minimum population genetic distance from hamming distance

Value

A dataframe mean minimum genetic distance between samples


CMWbio/geaR documentation built on June 21, 2019, 10:48 a.m.