makeGear: make gear object

View source: R/gear-class.R

makeGearR Documentation

make gear object

Description

make a gear object from cogs

Usage

makeGear(loci, populations, outgroup = vector("character", 1), cogs = list())

Arguments

loci

GRangesList containing genomic loci to work on

populations

data.frame containing two columns Sample and Population

outgroup

character the population in the populations argument that corresponds to the outgroup

cogs

list a list of cog objects for the analysis

Details

This object contains cog objects to allow for multiple analyses to be carried out on the same loci


CMWbio/geaR documentation built on April 22, 2023, 6:23 a.m.