neisPi: Calculates Nei's nucleotide diversity (pi)
In CMWbio/geaR: GDS Evolutionary Analysis in R
neisPi R Documentation
Calculates Nei's nucleotide diversity (pi)
Description
Calculates Nei (1987) pi from hamming distance
Usage
neisPi(distMat, popList, ploidy = 2)
Arguments
distMat
hamming distance matrix calculated using the hidden function genoDist
popList
List of populations made from pops dataframe provided by users
ploidy
numeric number of chromosomes
Details
Authours: Chris Ward
calculates within population nucleotide diversity
Value
A dataframe mean nucleotide diversity within each populaiton
CMWbio/geaR documentation built on April 22, 2023, 6:23 a.m.
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| neisPi | R Documentation |
Calculates Nei's nucleotide diversity (pi)
Description
Calculates Nei (1987) pi from hamming distance
Usage
neisPi(distMat, popList, ploidy = 2)
Arguments
distMat |
hamming distance matrix calculated using the hidden function |
popList |
List of populations made from |
ploidy |
|
Details
Authours: Chris Ward calculates within population nucleotide diversity
Value
A dataframe mean nucleotide diversity within each populaiton
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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