getPositionFromDB-methods: getPositionFromDB

getPositionFromDBR Documentation

getPositionFromDB

Description

extracts a partition scheme from a codon DB

Usage

getPositionFromDB(DB, positions)

Arguments

DB

GRange or character. Either the path to a SQL database or GRange object containing codon information.

positions

character vector containing any of codec("first", "second", "third")

Details

Accepts both GRange and SQL codon databases generated using buildCodonDB

Value

a GRange object containing specified codon positions.


CMWbio/geaR documentation built on April 22, 2023, 6:23 a.m.