cast_granges: Casts genomic regions into 'GRanges' format
In CompEpigen/scMethrix: Fast and efficient summarization of single cell whole genome bisulfate data
Description
Usage
Arguments
Details
Value
Examples
Description
Casts genomic regions into GRanges format
Usage
1
cast_granges(regions)
Arguments
regions
GRanges or data.frame; The input regions to cast to GRanges
Details
Casts the input as a GRanges object. Input can be GRanges or a
data.frame-compatible class that can be cast through as.data.frame(). Input BED format
must be chr-start-end for data.frame objects.
Value
GRanges object with the input regions
Examples
1
2
regions = data.table(chr = 'chr1', start = 1, end = 100)
cast_granges(regions)
CompEpigen/scMethrix documentation built on Nov. 6, 2021, 3:09 p.m.
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Description Usage Arguments Details Value Examples
Description
Casts genomic regions into GRanges format
Usage
1 | cast_granges(regions)
|
Arguments
regions |
GRanges or data.frame; The input regions to cast to |
Details
Casts the input as a GRanges object. Input can be GRanges or a
data.frame-compatible class that can be cast through as.data.frame(). Input BED format
must be chr-start-end for data.frame objects.
Value
GRanges object with the input regions
Examples
1 2 | regions = data.table(chr = 'chr1', start = 1, end = 100)
cast_granges(regions)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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