export_bsseq: Convert 'scMethrix' to 'bsseq' object

In CompEpigen/scMethrix: Fast and efficient summarization of single cell whole genome bisulfate data

Description

Convert scMethrix to bsseq object

Usage

export_bsseq(scm, m_assay = "score", c_assay = "counts", path = NULL)

Arguments

scm	methrix object
m_assay	matrix; the assay containing methylation scores
c_assay	matrix; the assay containing count scores
path	string; the path of the export directory

Details

Takes scMethrix object and returns a bsseq object.

Value

An object of class bsseq

Examples

## Not run: 
data('scMethrix_data')
export_bsseq(scMethrix_data)

## End(Not run)

CompEpigen/scMethrix documentation built on Nov. 6, 2021, 3:09 p.m.