convert_HDF5_scMethrix: Converts HDF5 'scMethrix' object to an in-memory 'scMethrix'...
In CompEpigen/scMethrix: Fast and efficient summarization of single cell whole genome bisulfate data
Description
Usage
Arguments
Details
Value
Examples
View source: R/scmethrix_operations.R
Description
Converts HDF5 scMethrix object to an in-memory scMethrix object.
Usage
1
convert_HDF5_scMethrix(scm = NULL, verbose = TRUE)
Arguments
scm
scMethrix; the single cell methylation experiment
verbose
boolean; Flag for outputting function status messages. Default = TRUE
Details
Takes an HDF%-based scMethrix object and returns with the same object with in-memory assay slots.
Value
An object of class scMethrix
Examples
1
2
3
4
data('scMethrix_data')
dir <- paste0(tempdir(),"/h5")
scm <- convert_scMethrix(scMethrix_data)
convert_HDF5_scMethrix(scm)
CompEpigen/scMethrix documentation built on Nov. 6, 2021, 3:09 p.m.
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Description Usage Arguments Details Value Examples
View source: R/scmethrix_operations.R
Description
Converts HDF5 scMethrix object to an in-memory scMethrix object.
Usage
1 | convert_HDF5_scMethrix(scm = NULL, verbose = TRUE)
|
Arguments
scm |
|
verbose |
boolean; Flag for outputting function status messages. Default = TRUE |
Details
Takes an HDF%-based scMethrix object and returns with the same object with in-memory assay slots.
Value
An object of class scMethrix
Examples
1 2 3 4 | data('scMethrix_data')
dir <- paste0(tempdir(),"/h5")
scm <- convert_scMethrix(scMethrix_data)
convert_HDF5_scMethrix(scm)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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