CalculateRefReads: CalculateRefReads

View source: R/CalculateRefReads.R

CalculateRefReadsR Documentation

CalculateRefReads

Description

We calculate the number of reference reads covering a variant using forward and reverse reads.

Usage

CalculateRefReads(SE, chromosome_prefix = "chrM")

Arguments

SE

SummarizedExperiment object.

chromosome_prefix

List of matrices for the reference reads.


CostaLab/sigurd documentation built on Feb. 10, 2025, 11:08 p.m.