getAltMatrix: getAltMatrix
In CostaLab/sigurd: Single cell Genotyping Using RNA Data
getAltMatrix R Documentation
getAltMatrix
Description
We get the alt values from the MAEGATK results.
Source: https://github.com/petervangalen/MAESTER-2021
Usage
getAltMatrix(SE_object, letter, chromosome_prefix = "chrM")
Arguments
SE_object
SummarizedExperiment object.
letter
The base you want to use. Character.
chromosome_prefix
The chromosome prefix used.
CostaLab/sigurd documentation built on Feb. 10, 2025, 11:08 p.m.
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| getAltMatrix | R Documentation |
getAltMatrix
Description
We get the alt values from the MAEGATK results. Source: https://github.com/petervangalen/MAESTER-2021
Usage
getAltMatrix(SE_object, letter, chromosome_prefix = "chrM")
Arguments
SE_object |
SummarizedExperiment object. |
letter |
The base you want to use. Character. |
chromosome_prefix |
The chromosome prefix used. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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