GetVariantInfo: GetVariantInfo
In CostaLab/sigurd: Single cell Genotyping Using RNA Data
View source: R/GetVariantInfo.R
GetVariantInfo R Documentation
GetVariantInfo
Description
We get the genotyping information for a set of variants.
The function returns a matrix with the values from the specified assay.
Usage
GetVariantInfo(SE, information = "consensus", variants = NULL, cells = NULL)
Arguments
SE
SummarizedExperiment object.
information
The assay with the desired information. Default: consensus
variants
A vector of variants.
cells
A vector of cell IDs. On default all cells are returned. Default: NULL
CostaLab/sigurd documentation built on Feb. 10, 2025, 11:08 p.m.
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View source: R/GetVariantInfo.R
| GetVariantInfo | R Documentation |
GetVariantInfo
Description
We get the genotyping information for a set of variants. The function returns a matrix with the values from the specified assay.
Usage
GetVariantInfo(SE, information = "consensus", variants = NULL, cells = NULL)
Arguments
SE |
SummarizedExperiment object. |
information |
The assay with the desired information. Default: consensus |
variants |
A vector of variants. |
cells |
A vector of cell IDs. On default all cells are returned. Default: NULL |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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