API for FloWuenne/scFunctions
Functions for single cell data analysis
| Global functions | |
|---|---|
| DE_Seurat | Man page Source code |
| auc_thresh_kmeans | Man page Source code |
| auc_thresh_kmeans_nextflow | Man page Source code |
| binarize_regulons | Man page Source code |
| binarize_regulons_nextflow | Man page Source code |
| calc_csi_module_activity | Man page Source code |
| calculate_csi | Man page Source code |
| calculate_rrs | Man page Source code |
| export_data_from_seurat | Man page Source code |
| export_seurat_to_shiny_scCluster | Man page Source code |
| extract_data_for_shiny_clustering | Man page Source code |
| impute_seurat_MAGIC | Man page Source code |
| perform_fgsea | Man page Source code |
| plot_bin_regulon_UMAP | Man page Source code |
| plot_csi_modules | Man page Source code |
| plot_rrs_ranking | Man page Source code |
| prepare_clustering_for_shiny | Man page Source code |
| summarize_cell_types | Man page Source code |
