EWCE-package: EWCE: Expression Weighted Celltype Enrichment

In NathanSkene/EWCE: Expression Weighted Celltype Enrichment

EWCE: Expression Weighted Celltype Enrichment

Description

Used to determine which cell types are enriched within gene lists. The package provides tools for testing enrichments within simple gene lists (such as human disease associated genes) and those resulting from differential expression studies. The package does not depend upon any particular Single Cell Transcriptome dataset and user defined datasets can be loaded in and used in the analyses.

Details

EWCE: Expression Weighted Celltype Enrichment

Used to determine which cell types are enriched within gene lists. The package provides tools for testing enrichments within simple gene lists (such as human disease associated genes) and those resulting from differential expression studies.

The package does not depend upon any particular Single Cell Transcriptome dataset and user defined datasets can be loaded in and used in the analyses.

Author(s)

Maintainer: Alan Murphy [e-mail] (ORCID)

Authors:

• Brian Schilder [e-mail] (ORCID)

• Nathan Skene [e-mail] (ORCID)

See Also

Useful links:

• https://github.com/NathanSkene/EWCE

• Report bugs at https://github.com/NathanSkene/EWCE/issues

NathanSkene/EWCE documentation built on April 30, 2024, 5:21 p.m.