delayedarray_normalize: Efficiently normalize a DelayedArray

In NathanSkene/EWCE: Expression Weighted Celltype Enrichment

Efficiently normalize a DelayedArray

Description

The following is a matrix normalization procedure that takes advantage of functions designed to be more efficient for DelayedArray objects.

Usage

delayedarray_normalize(
  exp,
  log_norm = TRUE,
  min_max = TRUE,
  plot_hists = FALSE,
  no_cores = 1
)

Arguments

exp	Input matrix (e.g. gene expression).
log_norm	Whether to first log-normalise exp with log1p.
min_max	Whether to min/max-normalise exp.
no_cores	Number of cores to parallelise across.

Value

Normalised matrix.

NathanSkene/EWCE documentation built on April 30, 2024, 5:21 p.m.