Files in NathanSkene/EWCE
Expression Weighted Celltype Enrichment

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
NEWS.md R/add_res_to_merging_list.r R/bin_columns_into_quantiles.r R/bin_specificity_into_quantiles.r R/bootstrap_enrichment_test.r R/cell_list_dist.r R/check_ewce_genelist_input.r R/controlled_geneset_enrichment.r R/convert_new_ewce_to_old.r R/convert_old_ewce_to_new.r R/drop_uninformative_genes.r R/ewce_expression_data.r R/ewce_plot.r R/filter_genes_without_1to1_homology.r R/fix_bad_hgnc_symbols.r R/fix_bad_mgi_symbols.r R/generate_bootstrap_plots.r R/generate_bootstrap_plots_for_transcriptome.r R/generate_celltype_data.r R/generate_controlled_bootstrap_geneset.r R/get_celltype_table.r R/get_summed_proportions.r R/merge_two_expfiles.r R/merged_ewce.r R/prep_dendro.r R/prepare_genesize_control_network.r README.Rmd README.md
inst/cit/EWCE.bib
inst/cit/nature.csl
man/add_res_to_merging_list.Rd man/bin_columns_into_quantiles.Rd man/bin_specificity_into_quantiles.Rd man/bootstrap_enrichment_test.Rd man/check_ewce_genelist_inputs.Rd man/controlled_geneset_enrichment.Rd man/convert_new_ewce_to_old.Rd man/convert_old_ewce_to_new.Rd man/drop_uninformative_genes.Rd man/ewce_expression_data.Rd man/ewce_plot.Rd man/filter_genes_without_1to1_homolog.Rd man/fix_bad_hgnc_symbols.Rd man/fix_bad_mgi_symbols.Rd man/generate_bootstrap_plots.Rd man/generate_bootstrap_plots_for_transcriptome.Rd man/generate_celltype_data.Rd man/generate_controlled_bootstrap_geneset.Rd man/get_celltype_table.Rd man/get_summed_proportions.Rd man/merge_two_expfiles.Rd man/merged_ewce.Rd man/prep_dendro.Rd man/prepare_genesize_control_network.Rd tests/testthat.R tests/testthat/test_CTD_mean.R tests/testthat/test_CTD_specificity.R tests/testthat/test_bootstrap_enrichment_test.R tests/testthat/test_bootstrap_enrichment_test_2.R tests/testthat/test_celltype_specificity_Aif1_Pvalb.R tests/testthat/test_controlled_geneset_enrichment.R tests/testthat/test_ewce_expression_data.R tests/testthat/test_filter_genes_without_1to1_homolog.R tests/testthat/test_fix_bad_mgi_symbols.r tests/testthat/test_merge_two_expfiles.R vignettes/EWCE.Rmd
NathanSkene/EWCE documentation built on June 19, 2021, 5:40 a.m.