View source: R/filter_ctd_genes.R
filter_ctd_genes | R Documentation |
Removes rows from each matrix within a CellTypeDataset (CTD) that are not
within gene_subset
.
filter_ctd_genes(ctd, gene_subset)
ctd |
CellTypeDataset. |
gene_subset |
Genes to subset to. |
Filtered CellTypeDataset.
ctd <- ewceData::ctd()
ctd <- standardise_ctd(ctd, input_species="mouse")
gene_subset <- rownames(ctd[[1]]$mean_exp)[1:100]
ctd_subset <- EWCE::filter_ctd_genes(ctd = ctd, gene_subset = gene_subset)
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