check_generate_controlled_bootstrap_geneset: generate_controlled_bootstrap_geneset

In NathanSkene/EWCE: Expression Weighted Celltype Enrichment

generate_controlled_bootstrap_geneset

Description

Check input arguments to generate_controlled_bootstrap_geneset.

Usage

check_generate_controlled_bootstrap_geneset(
  controlledCT,
  annotLevel,
  sct_data,
  hits
)

Arguments

controlledCT	[Optional] If not NULL, and instead is the name of a cell type, then the bootstrapping controls for expression within that cell type.
annotLevel	An integer indicating which level of sct_data to analyse (Default: 1).
sct_data	List generated using generate_celltype_data.
hits	List of gene symbols containing the target gene list. Will automatically be converted to human gene symbols if geneSizeControl=TRUE.

Value

Null output.

NathanSkene/EWCE documentation built on Nov. 3, 2024, 8:16 a.m.