drop_nonexpressed_cells: Drop cells with zero gene counts
In NathanSkene/EWCE: Expression Weighted Celltype Enrichment
View source: R/drop_nonexpressed_cells.R
drop_nonexpressed_cells R Documentation
Drop cells with zero gene counts
Description
Remove columns (cells) in which (gene) counts sum to zero.
Usage
drop_nonexpressed_cells(exp, annotLevels, verbose = TRUE)
Arguments
exp
Gene expression matrix.
annotLevels
Cell-wise annotations to be subset
if some cells are dropped.
verbose
Print messages.
Value
List of filtered exp and annotLevels.
NathanSkene/EWCE documentation built on April 10, 2024, 1:02 a.m.
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View source: R/drop_nonexpressed_cells.R
| drop_nonexpressed_cells | R Documentation |
Drop cells with zero gene counts
Description
Remove columns (cells) in which (gene) counts sum to zero.
Usage
drop_nonexpressed_cells(exp, annotLevels, verbose = TRUE)
Arguments
exp |
Gene expression matrix. |
annotLevels |
Cell-wise annotations to be subset if some cells are dropped. |
verbose |
Print messages. |
Value
List of filtered exp and annotLevels.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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