get_exp_data_for_bootstrapped_genes: get_exp_data_for_bootstrapped_genes

In NathanSkene/EWCE: Expression Weighted Celltype Enrichment

get_exp_data_for_bootstrapped_genes

Description

Support function for generate_bootstrap_plots_for_transcriptome.

Usage

get_exp_data_for_bootstrapped_genes(
  results,
  signif_res,
  sct_data,
  hits,
  combinedGenes,
  annotLevel,
  nReps = 100,
  as_sparse = TRUE,
  verbose = TRUE
)

Arguments

signif_res	signif_res (#fix).
sct_data	List generated using generate_celltype_data.
hits	Gene hits.
combinedGenes	Combined list of genes from sct_data, hits, and background bg.
annotLevel	An integer indicating which level of sct_data to analyse (Default: 1).
verbose	Print messages.
full_results	full_results (#fix).

Value

exp_mats

NathanSkene/EWCE documentation built on April 10, 2024, 1:02 a.m.