report_dge: Report DGE

In NathanSkene/EWCE: Expression Weighted Celltype Enrichment

Report DGE

Description

Report differential gene expression (DGE) results

Usage

report_dge(exp, keep_genes, adj_pval_thresh = 0.05, verbose = TRUE)

Arguments

exp	Gene expression matrix.
keep_genes	Genes kept after DGE.
adj_pval_thresh	Minimum differential expression significance that a gene must demonstrate across level2annot (i.e. cell types).
verbose	Print messages. #' @inheritParams orthogene::convert_orthologs

Value

Null output.

NathanSkene/EWCE documentation built on April 10, 2024, 1:02 a.m.