run_limma | R Documentation |
Run Differential Gene Expression with limma.
run_limma(exp, level2annot, mtc_method = "BH", verbose = TRUE, ...)
exp |
Expression matrix with gene names as rownames. |
level2annot |
Array of cell types, with each sequentially corresponding a column in the expression matrix. |
mtc_method |
Multiple-testing correction method used by DGE step. See p.adjust for more details. |
verbose |
Print messages. #' @inheritParams orthogene::convert_orthologs |
... |
Additional arguments to be passed to
gorth or homologene. |
limma
results.
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