get_sub_SNP_LOC_DATA: Download genome ref: piggyback
In NathanSkene/MAGMA_Celltyping: Find Causal Cell-Types Underlying Complex Trait Genetics
View source: R/get_sub_SNP_LOC_DATA.R
get_sub_SNP_LOC_DATA R Documentation
Download genome ref: piggyback
Description
Download and decompress the genome reference needed to run
map_snps_to_genes,
If the file already exists, it will simply return the path.
Usage
get_sub_SNP_LOC_DATA(
storage_dir = tools::R_user_dir(package = "MAGMA.Celltyping", which = "cache")
)
Source
URL <- paste(
"https://github.com/neurogenomics/MAGMA_Celltyping/raw/master/",
"data/sub_SNP_LOC_DATA.rda", sep="/")
tmp <- file.path(tempdir(),basename(URL))
piggyback::pb_upload(file = tmp,
repo = "neurogenomics/MAGMA_Celltyping",
overwrite = TRUE)
NathanSkene/MAGMA_Celltyping documentation built on Aug. 21, 2023, 8:55 a.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/get_sub_SNP_LOC_DATA.R
| get_sub_SNP_LOC_DATA | R Documentation |
Download genome ref: piggyback
Description
Download and decompress the genome reference needed to run map_snps_to_genes, If the file already exists, it will simply return the path.
Usage
get_sub_SNP_LOC_DATA(
storage_dir = tools::R_user_dir(package = "MAGMA.Celltyping", which = "cache")
)
Source
URL <- paste(
"https://github.com/neurogenomics/MAGMA_Celltyping/raw/master/",
"data/sub_SNP_LOC_DATA.rda", sep="/")
tmp <- file.path(tempdir(),basename(URL))
piggyback::pb_upload(file = tmp,
repo = "neurogenomics/MAGMA_Celltyping",
overwrite = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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