gwas_munged: Munged GWAS
In NathanSkene/MAGMA_Celltyping: Find Causal Cell-Types Underlying Complex Trait Genetics
gwas_munged R Documentation
Munged GWAS
Description
Example GWAS summary statistics standardised with
format_sumstats.
Original GWAS performed on Educational Attainment.
Usage
data("gwas_munged")
Format
An object of class data.table (inherits from data.frame) with 93 rows and 9 columns.
Source
gwas_ss <- system.file("extdata", "eduAttainOkbay.txt",
package = "MungeSumstats")
gwas_munged_path <- MungeSumstats::format_sumstats(gwas_ss)
gwas_munged <- data.table::fread(gwas_munged_path)
usethis::use_data(gwas_munged, overwrite = TRUE)
NathanSkene/MAGMA_Celltyping documentation built on Aug. 21, 2023, 8:55 a.m.
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| gwas_munged | R Documentation |
Munged GWAS
Description
Example GWAS summary statistics standardised with format_sumstats. Original GWAS performed on Educational Attainment.
Usage
data("gwas_munged")
Format
An object of class data.table (inherits from data.frame) with 93 rows and 9 columns.
Source
gwas_ss <- system.file("extdata", "eduAttainOkbay.txt",
package = "MungeSumstats")
gwas_munged_path <- MungeSumstats::format_sumstats(gwas_ss)
gwas_munged <- data.table::fread(gwas_munged_path)
usethis::use_data(gwas_munged, overwrite = TRUE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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