getBarcodeLabels: Retrieve Barcode Information from PacBioCmpH5
In PacificBiosciences/R-pbh5: Interface to Pacific Biosciences HDF5 Files

Description Usage Arguments Examples

Retrieves the available barcode information from a file. In order for this to work the file has to be produced using a barcode-based workflow - this is not common.

1	getBarcodeLabels(cmpH5, idx = 1:nrow(cmpH5), mode = NA)

`cmpH5`	Object of PacBioCmpH5
`idx`	Index vector ranging from 1 to nrow(cmpH5)
`mode`	The scoring mode to return, this is generally predetermined, but can be overidden here

  require(pbh5)
  gc()
  cmpH5 <- PacBioCmpH5(system.file("h5_files",  "aligned_reads.cmp.h5",
  package = "pbh5"))
  ## Not run: 
    table(getBarcodeLabels(cmpH5))
  
## End(Not run)