Description Usage Arguments Value Examples
Gets an element from refGroup table using any of name, index, or fasta name.
1 | getRefPath(cmpH5, refSeq)
|
cmpH5 |
|
refSeq |
Any of: index, name, or name from the fasta file. |
character representing the absolute path to the reference group.
1 2 3 4 5 | gc()
require(pbh5)
cmpH5 <- PacBioCmpH5(system.file("h5_files", "aligned_reads.cmp.h5", package = "pbh5"))
getRefPath(cmpH5, 1) == getRefPath(cmpH5, "ref000001")
getRefMD5(cmpH5, 1)
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