XGR_plot_enrichment: Plot XGR enrichment

In RajLabMSSM/echoannot: echoverse module: Annotate fine-mapping results

Plot XGR enrichment

Description

Plot XGR enrichment.

Usage

XGR_plot_enrichment(
  enrich_res,
  adjp_thresh = 0.05,
  top_annotations = NULL,
  show_plot = TRUE
)

See Also

Other XGR: XGR_enrichment_bootstrap(), XGR_enrichment_plot(), XGR_enrichment(), XGR_filter_assays(), XGR_filter_sources(), XGR_import_annotations(), XGR_iterate_enrichment(), XGR_iterate_overlap(), XGR_merge_and_process(), XGR_parse_metadata(), XGR_prepare_foreground_background(), XGR_query(), XGR_sep_handler(), xgr_example

Examples

## Not run: 
enrich_res <- XGR_iterate_enrichment(
    dat = echodata::get_Nalls2019_merged(),
    foreground_filter = "Consensus_SNP",
    background_filter = "leadSNP",
    lib.selections = c("ENCODE_TFBS_ClusteredV3_CellTypes")
)
XGR_plot_enrichment(enrich_res)

## End(Not run)

RajLabMSSM/echoannot documentation built on Oct. 26, 2023, 2:41 p.m.