xgr_example: Example XGR query

In RajLabMSSM/echoannot: echoverse module: Annotate fine-mapping results

Example XGR query

Description

Example XGR query results from XGR via XGR_query using the "ENCODE_DNaseI_ClusteredV3_CellTypes" dataset.

Usage

data("xgr_example")

Format

An object of class GRanges of length 8490.

Source

xgr_example <- echoannot::XGR_query( c("ENCODE_DNaseI_ClusteredV3_CellTypes"), dat = echodata::BST1) usethis::use_data(xgr_example, overwrite = TRUE)

See Also

Other XGR: XGR_enrichment_bootstrap(), XGR_enrichment_plot(), XGR_enrichment(), XGR_filter_assays(), XGR_filter_sources(), XGR_import_annotations(), XGR_iterate_enrichment(), XGR_iterate_overlap(), XGR_merge_and_process(), XGR_parse_metadata(), XGR_plot_enrichment(), XGR_prepare_foreground_background(), XGR_query(), XGR_sep_handler()

RajLabMSSM/echoannot documentation built on Oct. 26, 2023, 2:41 p.m.