CustomInteractionScore: function to caculate Interaction score
In RyanYip-Kat/yipCat: Some function like ArchR style in Seurat Object

function to caculate Interaction score

CustomInteractionScore(
  seurat = NULL,
  column = NULL,
  idents = NULL,
  interaction_csv = NULL,
  slot = "data",
  eps = 1e-04
)

`seurat`	a seurat object.
`column`	which column in metadata as idents.
`idents`	which idents to be used for scoring.
`interaction_csv`	csv file,include two columns, left Ligand,right Receptor
`slot`	slot name .

RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.

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