DoLikeArchRHeatmap: function doheatmap like DoHeatmap in seurat package

Description Usage Arguments

View source: R/Heatmap.R

Description

function doheatmap like DoHeatmap in seurat package

Usage

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DoLikeArchRHeatmap(
  seurat = NULL,
  groupBy = NULL,
  N = 30,
  slot = "scale.data",
  scale = TRUE,
  limits = NULL,
  threads = 8
)

Arguments

seurat

an seurat object.

groupBy

which group used as Idents in seurat when find markers.

N

the top number features to show in heatmap

slot

which slot to be use in heatmap,default(scale.data).

scale

whether do scale in heatmap.

limits

limits the max and min value in heatmap.

threads

the number of cores to be used.


RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.