Entropy: Calculate the expression entropy of each gene
In RyanYip-Kat/yipCat: Some function like ArchR style in Seurat Object
Description
Usage
Arguments
Value
Description
Calculate the expression entropy of each gene
Usage
1
Entropy(expr, r = 1)
Arguments
expr
The expression matrix. Rows should be genes and columns should be cells.
r
A small fixed value to avoid log(0) of mean gene expression levels. The default value of r is set to 1, but can also be set to other values such as 0.1 and 0.01.
Value
A tibble object with three columns 'Gene', 'mean.expr' and 'entropy'.
RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.
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Description Usage Arguments Value
Description
Calculate the expression entropy of each gene
Usage
1 | Entropy(expr, r = 1)
|
Arguments
expr |
The expression matrix. Rows should be genes and columns should be cells. |
r |
A small fixed value to avoid log(0) of mean gene expression levels. The default value of r is set to 1, but can also be set to other values such as 0.1 and 0.01. |
Value
A tibble object with three columns 'Gene', 'mean.expr' and 'entropy'.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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