entropy_fit: Fit the relationship between expression entropy and mean gene...

In RyanYip-Kat/yipCat: Some function like ArchR style in Seurat Object

Description

Fit the relationship between expression entropy and mean gene expression using loess regression.

Usage

entropy_fit(.x, span = 0.5, mt.method = c("fdr","BH"))

Arguments

.x	A tibble object returned from the Entropy function.
span	The parameter α which controls the degree of smoothing.
mt.method	The multiple testing method used in p.adjust.

Value

A tibble object with six columns.

Examples

ent.res <- Entropy(expr)
ent.res <- entropy_fit(ent.res, span = 0.3, mt.method = "fdr")

RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.