matr.filter: Filtering out low-abundance genes and low-quality cells
In RyanYip-Kat/yipCat: Some function like ArchR style in Seurat Object

Description Usage Arguments Value Examples

Filtering out low-abundance genes and low-quality cells

1	matr.filter(expr, min.cells = 10, min.genes = 10)

`expr`	The expression matrix. Rows should be genes and columns should be cells.
`min.cells`	Include genes detected in at least this many cells.
`min.genes`	Include cells where at least this many genes are detected.

A filtered gene expression matrix.

expr <- matrix(data = rbinom(n = 100, size = 20, prob = 0.5 ), nrow = 10)
expr
filtered.expr <- matr.filter(expr, min.cells = 3, min.genes = 3)
filtered.expr