exportEmbCol: a function to export embedding and cloumn to csv file
In RyanYip-Kat/yipCat: Some function like ArchR style in Seurat Object
Description
a function to export embedding and cloumn to csv file
Usage
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exportEmbCol(
seurat = NULL,
cells = NULL,
exportCol = "seurat_clusters",
embedding = "umap",
outdir = "EmbCol"
)
Arguments
seurat
a seurat object
cells
cell barcode vector.
exportCol
column names in metadata.
embedding
reduction names in seurat object.
outdir
path to save tables
RyanYip-Kat/yipCat documentation built on Dec. 18, 2021, 11:55 a.m.
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Description
a function to export embedding and cloumn to csv file
Usage
1 2 3 4 5 6 7 | exportEmbCol(
seurat = NULL,
cells = NULL,
exportCol = "seurat_clusters",
embedding = "umap",
outdir = "EmbCol"
)
|
Arguments
seurat |
a seurat object |
cells |
cell barcode vector. |
exportCol |
column names in metadata. |
embedding |
reduction names in seurat object. |
outdir |
path to save tables |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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