curatedPCaDatasets_hieronymus: Hieronymus et al. MAE-object
In Syksy/curatedPCaData: Curated Prostate Cancer Data
curatedPCaDatasets_hieronymus R Documentation
Hieronymus et al. MAE-object
Description
MultiAssayExperiment object containing copy number alteration (cna) for
Hieronymus et al.
Format
A MAE object spanning 104 tumor samples
- cna.gistic
matrix with 18026 rows and 104 columns, from GISTIC
discretized copy number alteration calls
Details
The data comprises of 104 samples, for which are available clinical
data and Copy Number Alteration, but no gene expression data – thus no
deconvolution results are available.
Value
A MultiAssayExperiment corresponding to the study and its available
omics.
Source
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54691
References
(PubMed)
Examples
mae_hieronymus <- getPCa('hieronymus')
Syksy/curatedPCaData documentation built on Nov. 4, 2023, 9:46 a.m.
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| curatedPCaDatasets_hieronymus | R Documentation |
Hieronymus et al. MAE-object
Description
MultiAssayExperiment object containing copy number alteration (cna) for Hieronymus et al.
Format
A MAE object spanning 104 tumor samples
- cna.gistic
matrix with 18026 rows and 104 columns, from GISTIC discretized copy number alteration calls
Details
The data comprises of 104 samples, for which are available clinical data and Copy Number Alteration, but no gene expression data – thus no deconvolution results are available.
Value
A MultiAssayExperiment corresponding to the study and its available omics.
Source
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54691
References
(PubMed)
Examples
mae_hieronymus <- getPCa('hieronymus')
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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