curatedPCaDatasets_hieronymus: Hieronymus et al. MAE-object

curatedPCaDatasets_hieronymusR Documentation

Hieronymus et al. MAE-object

Description

MultiAssayExperiment object containing copy number alteration (cna) for Hieronymus et al.

Format

A MAE object spanning 104 tumor samples

cna.gistic

matrix with 18026 rows and 104 columns, from GISTIC discretized copy number alteration calls

Details

The data comprises of 104 samples, for which are available clinical data and Copy Number Alteration, but no gene expression data – thus no deconvolution results are available.

Value

A MultiAssayExperiment corresponding to the study and its available omics.

Source

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54691

References

(PubMed)

Examples

mae_hieronymus <- getPCa('hieronymus')

Syksy/curatedPCaData documentation built on Oct. 11, 2024, 7:05 a.m.